| Scientific name | Authorship | Rank | Status | Images | |
|---|---|---|---|---|---|
| Phyllonorycter ruwenzori | De Prins, 2012 | species | Accepted | ||
| Phyllonorycter sagitella | (Bjerkander, 1790) | species | Accepted | ||
| Phyllonorycter salicicolella | (Sircom, 1848) | species | Accepted | ||
| Phyllonorycter saliciella | (Knitschke, 1927) | species | Misapplied | ||
| Phyllonorycter salicifoliella | (Chambers, 1871) | species | Accepted | ||
| Phyllonorycter salicifoliella | (Clemens, 1861) | species | Misapplied | ||
| Phyllonorycter salicifoliella | (Packard, 1869) | species | Misapplied | ||
| Phyllonorycter salicivorella | (Braun, 1908) | species | Synonym | ||
| Phyllonorycter salictella | (Zeller, 1846) | species | Accepted | ||
| Phyllonorycter salincolella | (Sorhagen, 1900) | species | Synonym | ||
| Phyllonorycter sandraella | (Opler, 1971) | species | Accepted | ||
| Phyllonorycter sangiovannella | (O. G. Costa, 1836) | species | Synonym | ||
| Phyllonorycter saportella | (Duponchel, [1840]) | species | Synonym | ||
| Phyllonorycter sardiniensis | (Amsel, 1939) | species | Synonym | ||
| Phyllonorycter scabiosaecolella | (Doubleday, 1859) | species | Synonym | ||
| Phyllonorycter scabiosella | (Douglas, 1853) | species | Accepted | ||
| Phyllonorycter schillei | (Klemensiewicz,) | species | Misapplied | ||
| Phyllonorycter schreberella | (Zeller, 1839) | species | Misapplied | ||
| Phyllonorycter schreberella | (Fabricius, 1781) | species | Accepted | ||
| Phyllonorycter schreberiella | Noreika, 1991 | species | Misapplied | ||
| Phyllonorycter scitulella | (Duponchel, 1843) | species | Accepted | ||
| Phyllonorycter scopariella | (Zeller, 1846) | species | Accepted | ||
| Phyllonorycter scorpius | Laštuvka & Laštuvka, 2006 | species | Synonym | ||
| Phyllonorycter scudderella | (Frey & Boll, 1873) | species | Accepted | ||
| Phyllonorycter securiferella | (Stainton, 1848) | species | Synonym |