| Scientific name | Authorship | Rank | Status | Images | |
|---|---|---|---|---|---|
| Phyllonorycter durangensis | Deschka, 1982 | species | Accepted | ||
| Phyllonorycter echinosparti | Laštuvka & Laštuvka, 2006 | species | Accepted | ||
| Phyllonorycter elatella | (Zeller, 1846) | species | Synonym | ||
| Phyllonorycter elmaella | Doğanlar & Mutuura, 1980 | species | Accepted | ||
| Phyllonorycter emberizaepenella | (Bouché, 1834) | species | Accepted | ||
| Phyllonorycter emberizaepennella | (Duponchel, 1843) | species | Misapplied | ||
| Phyllonorycter emberizipennella | (Meyrick, 1912) | species | Synonym | ||
| Phyllonorycter encaeria | (Meyrick, 1911) | species | Accepted | ||
| Phyllonorycter enchalca | (Turner, 1940) | species | Misapplied | ||
| Phyllonorycter enchalcoa | (Turner, 1939) | species | Accepted | ||
| Phyllonorycter endriella | (Minà-Palumbo, 1884) | species | Misapplied | ||
| Phyllonorycter endryella | (Mann, 1855) | species | Accepted | ||
| Phyllonorycter engelhardiae | Kumata, 1973 | species | Accepted | ||
| Phyllonorycter eophanes | (Meyrick, 1931) | species | Synonym | ||
| Phyllonorycter epispila | (Meyrick, 1915) | species | Accepted | ||
| Phyllonorycter eratantha | (Meyrick, 1922) | species | Accepted | ||
| Phyllonorycter erinaceae | Laštuvka & Laštuvka, 2013 | species | Accepted | ||
| Phyllonorycter ermani | (Kumata, 1963) | species | Accepted | ||
| Phyllonorycter erugatus | Davis & Deschka, 2001 | species | Accepted | ||
| Phyllonorycter esperella | (Goeze, 1783) | species | Accepted | ||
| Phyllonorycter estrela | Laštuvka & Laštuvka, 2006 | species | Accepted | ||
| Phyllonorycter etnensis | Laštuvka & Laštuvka, 2006 | species | Accepted | ||
| Phyllonorycter eugregori | Laštuvka & Laštuvka, 2006 | species | Accepted | ||
| Phyllonorycter evgenia | auct. | species | Misapplied | ||
| Phyllonorycter extincta | Deschka, 1974 | species | Accepted |